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National Center for Biotechnology Information (NCBI) Organismal Classification
Last uploaded:
January 16, 2025
Acronym | NCBITAXON |
Visibility | Public |
Description | The NCBI Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases. |
Status | Production |
Format | UMLS |
Contact | NCBI information, info@ncbi.nlm.nih.gov |
Categories | Taxonomic Classification |
Groups | OBO Foundry, Unified Medical Language System |
License Information | This ontology is made available via the UMLS. Users of all UMLS ontologies must abide by the terms of the UMLS license. |
Version | Released | Uploaded | Downloads |
---|---|---|---|
NCBI2024_04_02 (Parsed, Indexed, Metrics, Annotator, Error Diff) | 11/04/2024 | 01/16/2025 | RDF/TTL | CSV | Diff |
2024AA (Archived) | 05/06/2024 | 08/28/2024 | RDF/TTL | Diff |
2023AB (Archived) | 11/06/2023 | 01/31/2024 | RDF/TTL | Diff |
2023AA (Archived) | 04/01/2023 | 08/07/2023 | RDF/TTL | Diff |
2022AB (Archived) | 11/07/2022 | 01/06/2023 | RDF/TTL | Diff |
2022AA (Archived) | 05/02/2022 | 06/15/2022 | RDF/TTL | Diff |
2021AB (Archived) | 11/01/2021 | 12/06/2021 | RDF/TTL |
2021AA (Archived) | 04/03/2021 | 12/06/2021 | RDF/TTL |
2020AB (Archived) | 11/02/2020 | 01/06/2021 | RDF/TTL |
2020AA (Archived) | 05/04/2018 | 09/24/2020 | RDF/TTL |
2019AB (Archived) | 11/04/2019 | 11/18/2019 | RDF/TTL |
2019AA (Archived) | 05/06/2019 | 08/27/2019 | RDF/TTL |
2018AB (Archived) | 11/05/2018 | 04/29/2019 | RDF/TTL |
2018AA (Archived) | 05/07/2018 | 07/06/2018 | RDF/TTL |
2017AB (Archived) | 11/06/2017 | 07/06/2018 | RDF/TTL |
2017AA (Archived) | 05/08/2017 | 04/06/2018 | RDF/TTL |
2016AB (Archived) | 02/06/2017 | 02/06/2017 | RDF/TTL |
2016AA (Archived) | 09/06/2016 | 09/06/2016 | RDF/TTL |
2015AB (Archived) | 07/20/2016 | 07/20/2016 | RDF/TTL |
2015AA (Archived) | 06/09/2015 | 06/09/2015 | RDF/TTL |
2015AA (Archived) | 06/09/2015 | 06/09/2015 | RDF/TTL |
2014AB (Archived) | 01/29/2015 | 01/29/2015 | RDF/TTL |
2014AA (Archived) | 01/01/2014 | 08/28/2014 | RDF/TTL |
1.2 (Archived) | 12/12/2011 | 07/11/2012 | OWL |
1.2 (Archived) | 10/27/2008 | 05/13/2009 | OBO |
more... |
- NeuroMorpho.Org Species Ontology v.1.0.0
- A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species.
- NeuroMorpho.Org Species Ontology v.1.2.2
- A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species. The ontology also include NIFSTD, Rat strain and Jax mice terms that are arranged in a single parent hierarchical tree.
Classes | 736,927 |
Individuals | 0 |
Properties | 4 |
Maximum depth | 37 |
Maximum number of children | 1,569 |
Average number of children | 5 |
Classes with a single child | 66,887 |
Classes with more than 25 children | 4,722 |
Classes with no definition | 736,927 |
Jump to:
Preferred Name | Penicillium | |
Synonyms |
Eupenicillium |
|
ID |
http://purl.bioontology.org/ontology/NCBITAXON/5073 |
|
altLabel |
Eupenicillium
|
|
Authority name |
Penicillium Link, 1809
|
|
cui |
C0030843
|
|
DIV |
Plants and Fungi
|
|
notation |
5073
|
|
prefLabel |
Penicillium
|
|
RANK |
genus
|
|
tui |
T004
|
|
subClassOf |
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- Problem retrieving properties:
Notes
Filter:
Add NCBO Web Widgets to your site for NCBITAXON
Widget type | Widget demonstration |
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Step 2: Follow the Instructions
For more help visit NCBO Widget Wiki |
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Example 1 (start typing the class name to get its full URI)
Example 2 (get the ID for a class) Example 3 (get the preferred name for a class) Step 2: Follow the Instructions
For more help visit NCBO Widget Wiki |
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Step 2: Follow the InstructionsCopy the code below and paste it to your HTML page <iframe frameborder="0" src="/widgets/visualization?ontology=NCBITAXON&class=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F2845750&apikey=YOUR_API_KEY"></iframe> For more help visit NCBO Widget Wiki |
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Step 2: Follow the InstructionsCopy the code below and paste it to your HTML page <link rel="stylesheet" type="text/css" href="/widgets/jquery.ncbo.tree.css"> <script src="/widgets/jquery.ncbo.tree-2.0.2.js"></script> <div id="widget_tree"></div> var widget_tree = $("#widget_tree").NCBOTree({ apikey: "YOUR_API_KEY", ontology: "NCBITAXON" }); You can also view a detailed demonstration For more help visit NCBO Widget Wiki |